Introduction to the scDblFinder packageUpdated 1 months ago

Pierre-Luc Germain, Aaron Lun

Rendered from introduction.Rmd in scDblFinder 1.21.0.
scDblFinderUpdated 1 months ago

Pierre-Luc Germain

Rendered from scDblFinder.Rmd in scDblFinder 1.21.0.
miRNA affinity models and the KdModel classUpdated 7 months ago

Pierre-Luc Germain, Michael Soutschek, Fridolin Gross

Rendered from Kdmodels.Rmd in scanMiR 1.13.0.
sechmUpdated 1 years ago

Pierre-Luc Germain

Rendered from sechm.Rmd in sechm 1.15.0.
Doublet identifiation in single-cell ATAC-seqUpdated 1 years ago

Pierre-Luc Germain

Rendered from scATAC.Rmd in scDblFinder 1.21.0.
Scanning sequences for miRNA binding sites and exploring matches with scanMiRUpdated 1 years ago

Fridolin Gross, Pierre-Luc Germain, Michael Soutschek

Rendered from scanning.Rmd in scanMiR 1.13.0.
SEtoolsUpdated 2 years ago

Pierre-Luc Germain

Rendered from SEtools.Rmd in SEtools 1.21.0.
Recovering intra-sample doubletsUpdated 3 years ago

Aaron Lun

Rendered from recoverDoublets.Rmd in scDblFinder 1.21.0.
scanMiRApp: shiny app and related convenience functionsUpdated 3 years ago

Pierre-Luc Germain, Michael Soutschek, Fridolin Groß

Rendered from scanMiRApp.Rmd in scanMiRApp 1.13.0.
The IndexedFst classUpdated 3 years ago

Pierre-Luc Germain

Rendered from IndexedFST.Rmd in scanMiRApp 1.13.0.
diffUTRUpdated 4 years ago

Pierre-Luc Germain

Rendered from diffUTR.Rmd in diffUTR 1.15.0.
diffUTR - diffSplice2Updated 4 years ago

Stefan Gerber, Pierre-Luc Germain

Rendered from diffSplice2.Rmd in diffUTR 1.15.0.
Detecting clusters of doublet cells with DE analysesUpdated 4 years ago

Aaron Lun

Rendered from findDoubletClusters.Rmd in scDblFinder 1.21.0.
Scoring potential doublets from simulated densitiesUpdated 4 years ago

Aaron Lun

Rendered from computeDoubletDensity.Rmd in scDblFinder 1.21.0.
The pipeComp frameworkUpdated 4 years ago

Pierre-Luc Germain

Rendered from pipeComp.Rmd in pipeComp 1.17.0.
The scRNA PipelineDefinitionUpdated 4 years ago

Pierre-Luc Germain, Anthony Sonrel, Mark D. Robinson

Rendered from pipeComp_scRNA.Rmd in pipeComp 1.17.0.
The DEA PipelineDefinitionUpdated 5 years ago

Pierre-Luc Germain

Rendered from pipeComp_dea.Rmd in pipeComp 1.17.0.